Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l1 | SAMN05444145_106141 | Not Available | Positive | 2502149 - 2502847 | 24836.6 |
| lsu ribosomal protein l10p | SAMN05444145_106142 | Not Available | Positive | 2502865 - 2503389 | 18947.1 |
| lsu ribosomal protein l12p | SAMN05444145_106143 | Not Available | Positive | 2503433 - 2503810 | 12778.4 |
| dna-directed rna polymerase subunit beta | SAMN05444145_106144 | Not Available | Positive | 2504043 - 2507903 | 143880.0 |
| dna-directed rna polymerase subunit beta' | SAMN05444145_106145 | Not Available | Positive | 2507939 - 2512198 | 157708.0 |
| outer membrane insertion c-terminal signal | SAMN05444145_106146 | Not Available | Negative | 2512292 - 2512840 | 19645.6 |
| regulatory protein, luxr family | SAMN05444145_106147 | Not Available | Positive | 2512928 - 2513677 | 28789.2 |
| l-serine ammonia-lyase | SAMN05444145_106148 | Not Available | Negative | 2513738 - 2514943 | 43189.4 |
| Trna-arg | Not Available | Not Available | Positive | 2515017 - 2515091 | Not Available |
| long-chain fatty acid transport protein | SAMN05444145_106150 | Not Available | Negative | 2515154 - 2516602 | 52631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
