Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444145_106131 | Not Available | Positive | 2497165 - 2498079 | 34833.0 |
| ribosomal-protein-serine acetyltransferase | SAMN05444145_106132 | Not Available | Negative | 2498141 - 2498662 | 19343.2 |
| Trna-thr | Not Available | Not Available | Positive | 2499084 - 2499157 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2499200 - 2499285 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2499375 - 2499450 | Not Available |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05444145_106136 | Not Available | Positive | 2499578 - 2500765 | 43537.6 |
| Trna-trp | Not Available | Not Available | Positive | 2500816 - 2500889 | Not Available |
| preprotein translocase subunit sece | SAMN05444145_106138 | Not Available | Positive | 2500908 - 2501105 | 7301.07 |
| transcription antitermination protein nusg | SAMN05444145_106139 | Not Available | Positive | 2501120 - 2501680 | 21136.5 |
| lsu ribosomal protein l11p | SAMN05444145_106140 | Not Available | Positive | 2501697 - 2502137 | 15754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
