Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_106121 | Not Available | Positive | 2483033 - 2484250 | 45966.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444145_106122 | Not Available | Positive | 2484252 - 2485286 | 38875.4 |
| protein of unknown function | SAMN05444145_106123 | Not Available | Positive | 2485332 - 2486831 | 53309.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_106124 | Not Available | Positive | 2486927 - 2489977 | 112944.0 |
| starch-binding associating with outer membrane | SAMN05444145_106125 | Not Available | Positive | 2489980 - 2491827 | 69311.8 |
| alpha-n-acetylglucosaminidase | SAMN05444145_106126 | Not Available | Positive | 2491916 - 2494114 | 83892.8 |
| cephalosporin-c deacetylase | SAMN05444145_106127 | Not Available | Positive | 2494111 - 2495403 | 48149.0 |
| Trna-met | Not Available | Not Available | Positive | 2495456 - 2495529 | Not Available |
| lsu ribosomal protein l31p | SAMN05444145_106129 | Not Available | Positive | 2495699 - 2495965 | 10149.3 |
| hypothetical protein | SAMN05444145_106130 | Not Available | Positive | 2496165 - 2497025 | 31129.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
