Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family with cupin sensor | SAMN05444145_106111 | Not Available | Positive | 2469251 - 2469808 | 20848.9 |
| acetyl-coa synthetase | SAMN05444145_106112 | Not Available | Positive | 2469812 - 2471467 | 62082.1 |
| predicted dehydrogenase | SAMN05444145_106113 | Not Available | Negative | 2471501 - 2472895 | 52215.4 |
| fad dependent oxidoreductase | SAMN05444145_106114 | Not Available | Negative | 2472897 - 2474738 | 66775.7 |
| mfs transporter, sugar porter (sp) family | SAMN05444145_106115 | Not Available | Negative | 2474750 - 2476135 | 50018.4 |
| protein of unknown function | SAMN05444145_106116 | Not Available | Negative | 2476139 - 2477179 | 39971.8 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444145_106117 | Not Available | Positive | 2477438 - 2478637 | 43707.9 |
| hexosaminidase | SAMN05444145_106118 | Not Available | Negative | 2478624 - 2480579 | 72439.1 |
| n-acylglucosamine 2-epimerase | SAMN05444145_106119 | Not Available | Negative | 2480558 - 2481784 | 47653.2 |
| predicted protein | SAMN05444145_106120 | Not Available | Positive | 2481979 - 2483001 | 36993.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
