Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase | SAMN05444145_10691 | Not Available | Negative | 2446951 - 2447946 | 36564.9 |
| agmatinase | SAMN05444145_10692 | Not Available | Positive | 2448207 - 2449259 | 38009.5 |
| sodium/proton antiporter, nhaa family | SAMN05444145_10693 | Not Available | Positive | 2449260 - 2450642 | 50495.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444145_10694 | Not Available | Positive | 2450639 - 2451340 | 25400.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444145_10695 | Not Available | Positive | 2451430 - 2452542 | 40635.9 |
| protein of unknown function | SAMN05444145_10696 | Not Available | Negative | 2452674 - 2453042 | 13815.2 |
| oxidoreductase family, c-terminal alpha/beta domain | SAMN05444145_10697 | Not Available | Negative | 2453136 - 2454389 | 47702.8 |
| sec-independent protein translocase protein tatc | SAMN05444145_10698 | Not Available | Negative | 2454416 - 2455303 | 33162.0 |
| sec-independent protein translocase protein tata | SAMN05444145_10699 | Not Available | Negative | 2455328 - 2455534 | 7456.2 |
| heat repeat | SAMN05444145_106100 | Not Available | Negative | 2455655 - 2459008 | 117110.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
