Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fused signal recognition particle receptor | SAMN05444145_10681 | Not Available | Negative | 2437490 - 2438488 | 36051.1 |
| hypothetical protein | SAMN05444145_10682 | Not Available | Positive | 2438716 - 2439645 | 34798.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_10683 | Not Available | Negative | 2439717 - 2441075 | 51830.0 |
| protein of unknown function | SAMN05444145_10684 | Not Available | Negative | 2441120 - 2441278 | 5918.35 |
| lsu ribosomal protein l33p | SAMN05444145_10685 | Not Available | Negative | 2441292 - 2441474 | 7076.7 |
| lsu ribosomal protein l28p | SAMN05444145_10686 | Not Available | Negative | 2441491 - 2441724 | 8606.64 |
| signal transduction histidine kinase | SAMN05444145_10687 | Not Available | Negative | 2441811 - 2443745 | 73432.5 |
| nicotinamide-nucleotide amidase/nicotinamide-nucleotide amidase | SAMN05444145_10688 | Not Available | Negative | 2443833 - 2444375 | 19133.2 |
| nicotinamide-nucleotide amidase | SAMN05444145_10689 | Not Available | Negative | 2444387 - 2445628 | 44713.1 |
| dihydroorotate oxidase a | SAMN05444145_10690 | Not Available | Negative | 2445635 - 2446756 | 40971.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
