Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN05444145_10671 | Not Available | Positive | 2428104 - 2429096 | 35690.0 |
| aminomethyltransferase | SAMN05444145_10672 | Not Available | Positive | 2429116 - 2430216 | 39770.2 |
| dihydroorotate dehydrogenase (fumarate) | SAMN05444145_10673 | Not Available | Positive | 2430239 - 2431207 | 34889.6 |
| uncharacterized protein | SAMN05444145_10674 | Not Available | Negative | 2431266 - 2431916 | 24929.4 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN05444145_10675 | Not Available | Positive | 2432032 - 2432799 | 27778.5 |
| threonine/serine exporter, thre | SAMN05444145_10676 | Not Available | Positive | 2432796 - 2433296 | 17727.6 |
| ribonucrease y | SAMN05444145_10677 | Not Available | Negative | 2433501 - 2435048 | 57786.8 |
| cell division protein zapa | SAMN05444145_10678 | Not Available | Negative | 2435389 - 2435688 | 11482.6 |
| hypothetical protein | SAMN05444145_10679 | Not Available | Negative | 2435738 - 2436049 | 11783.3 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN05444145_10680 | Not Available | Negative | 2436205 - 2437503 | 49076.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
