Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | SAMN05444145_10661 | Not Available | Positive | 2412528 - 2413547 | 36303.2 |
| rod shape-determining protein mrec | SAMN05444145_10662 | Not Available | Positive | 2413755 - 2414606 | 31621.6 |
| rod shape-determining protein mred | SAMN05444145_10663 | Not Available | Positive | 2414610 - 2415128 | 18722.8 |
| peptidoglycan glycosyltransferase | SAMN05444145_10664 | Not Available | Positive | 2415125 - 2416951 | 68867.5 |
| rod shape determining protein roda | SAMN05444145_10665 | Not Available | Positive | 2416941 - 2418383 | 53435.0 |
| ca2+-transporting atpase | SAMN05444145_10666 | Not Available | Positive | 2418391 - 2420967 | 94351.2 |
| pap2 superfamily protein | SAMN05444145_10667 | Not Available | Positive | 2420991 - 2422223 | 45161.5 |
| glutamate dehydrogenase (nad) | SAMN05444145_10668 | Not Available | Negative | 2422281 - 2423618 | 48746.7 |
| pyruvate phosphate dikinase, pep/pyruvate binding domain | SAMN05444145_10669 | Not Available | Negative | 2423715 - 2426699 | 113229.0 |
| hypothetical protein | SAMN05444145_10670 | Not Available | Positive | 2426788 - 2427993 | 47448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
