Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444145_10651 | Not Available | Positive | 2403707 - 2404615 | 33710.2 |
| acyl-coa thioester hydrolase | SAMN05444145_10652 | Not Available | Negative | 2404612 - 2405007 | 14959.0 |
| l-threonylcarbamoyladenylate synthase | SAMN05444145_10653 | Not Available | Negative | 2405009 - 2405590 | 20720.2 |
| lactoylglutathione lyase | SAMN05444145_10654 | Not Available | Negative | 2405598 - 2405978 | 14563.2 |
| sialate o-acetylesterase | SAMN05444145_10655 | Not Available | Positive | 2406123 - 2407679 | 57054.3 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05444145_10656 | Not Available | Positive | 2407781 - 2408506 | 27241.1 |
| rubrerythrin | SAMN05444145_10657 | Not Available | Negative | 2408647 - 2409300 | 24355.4 |
| lipocalin-like domain-containing protein | SAMN05444145_10658 | Not Available | Positive | 2409493 - 2409924 | 15424.4 |
| glucose-6-phosphate isomerase | SAMN05444145_10659 | Not Available | Negative | 2409999 - 2411330 | 47332.1 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05444145_10660 | Not Available | Negative | 2411337 - 2412344 | 36842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
