Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101144 | Not Available | Negative | 182959 - 183432 | 17267.7 |
| susd family protein | SAMN05444145_101145 | Not Available | Negative | 183458 - 184924 | 54741.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_101146 | Not Available | Negative | 184960 - 187866 | 109316.0 |
| pp_00144 | SAMN05444145_101147 | Not Available | Negative | 188359 - 189381 | Not Available |
| putative hemolysin | SAMN05444145_101148 | Not Available | Negative | 189378 - 190655 | 47037.2 |
| arginyl-trna synthetase | SAMN05444145_101149 | Not Available | Positive | 190771 - 192552 | 66752.7 |
| protein of unknown function | SAMN05444145_101150 | Not Available | Positive | 192952 - 194505 | 57148.4 |
| outer membrane protein ompa | SAMN05444145_101151 | Not Available | Positive | 194630 - 195592 | 35684.7 |
| hypothetical protein | SAMN05444145_101152 | Not Available | Positive | 195737 - 196024 | 10989.4 |
| hypothetical protein | SAMN05444145_101153 | Not Available | Positive | 196187 - 197839 | 63892.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
