Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444145_10641 | Not Available | Negative | 2392948 - 2393913 | 36840.3 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444145_10642 | Not Available | Negative | 2394061 - 2394597 | 20128.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444145_10643 | Not Available | Negative | 2394625 - 2395134 | 19157.0 |
| beta-barrel assembly machine subunit bama | SAMN05444145_10644 | Not Available | Negative | 2395231 - 2397771 | 96434.2 |
| undecaprenyl pyrophosphate synthetase | SAMN05444145_10645 | Not Available | Negative | 2397799 - 2398512 | 26908.8 |
| nad+ kinase | SAMN05444145_10646 | Not Available | Negative | 2398568 - 2399446 | 31755.1 |
| pyridoxine 5-phosphate synthase | SAMN05444145_10647 | Not Available | Positive | 2399699 - 2400412 | 26260.2 |
| lysophospholipase l1 | SAMN05444145_10648 | Not Available | Positive | 2400421 - 2401068 | 24226.2 |
| poly(a) polymerase | SAMN05444145_10649 | Not Available | Positive | 2401079 - 2402470 | 52625.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444145_10650 | Not Available | Negative | 2402480 - 2403418 | 33760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
