Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10631 | Not Available | Negative | 2370625 - 2373516 | 107752.0 |
| starch-binding associating with outer membrane | SAMN05444145_10632 | Not Available | Negative | 2373540 - 2375405 | 69645.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10633 | Not Available | Negative | 2375419 - 2378607 | 117884.0 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_10634 | Not Available | Negative | 2378704 - 2380296 | 57660.5 |
| rhamnogalacturonyl hydrolase yesr | SAMN05444145_10635 | Not Available | Negative | 2380412 - 2381506 | 41498.6 |
| protein of unknown function | SAMN05444145_10636 | Not Available | Negative | 2381528 - 2383546 | 74045.2 |
| bnr repeat-containing family member | SAMN05444145_10637 | Not Available | Negative | 2383570 - 2384997 | 54459.1 |
| glycosyl hydrolase family 88 | SAMN05444145_10638 | Not Available | Negative | 2385001 - 2386182 | 44812.3 |
| signal transduction histidine kinase | SAMN05444145_10639 | Not Available | Negative | 2386292 - 2390353 | 152340.0 |
| heparinase ii/iii-like protein | SAMN05444145_10640 | Not Available | Negative | 2390554 - 2392746 | 81384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
