Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10611 | Not Available | Positive | 2330810 - 2332327 | 57799.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10612 | Not Available | Positive | 2332372 - 2335593 | 118614.0 |
| starch-binding associating with outer membrane | SAMN05444145_10613 | Not Available | Positive | 2335613 - 2337283 | 63309.4 |
| hypothetical protein | SAMN05444145_10614 | Not Available | Positive | 2337273 - 2338238 | 37158.3 |
| beta-glucosidase | SAMN05444145_10615 | Not Available | Positive | 2338235 - 2341012 | 103056.0 |
| alpha-n-acetylglucosaminidase | SAMN05444145_10616 | Not Available | Positive | 2341043 - 2343223 | 84836.0 |
| hypothetical protein | SAMN05444145_10617 | Not Available | Positive | 2343220 - 2344713 | 57764.5 |
| arylsulfatase a | SAMN05444145_10618 | Not Available | Negative | 2344842 - 2346248 | 52164.3 |
| bnr repeat-like domain-containing protein | SAMN05444145_10619 | Not Available | Negative | 2346268 - 2348004 | 63877.5 |
| tetratricopeptide repeat-containing protein | SAMN05444145_10620 | Not Available | Negative | 2348014 - 2351343 | 127228.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
