Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN05444145_105305 | Not Available | Positive | 2315714 - 2317294 | 59990.5 |
| methyltransferase domain-containing protein | SAMN05444145_1062 | Not Available | Negative | 2317744 - 2318568 | 32721.6 |
| putative zinc ribbon domain-containing protein | SAMN05444145_1063 | Not Available | Negative | 2318570 - 2318851 | 10975.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444145_1064 | Not Available | Negative | 2318959 - 2319768 | 29901.2 |
| hypothetical protein | SAMN05444145_1065 | Not Available | Negative | 2319780 - 2319971 | 7630.92 |
| diaminopimelate epimerase | SAMN05444145_1066 | Not Available | Negative | 2319990 - 2320796 | 29255.4 |
| nitroreductase | SAMN05444145_1067 | Not Available | Positive | 2320924 - 2321670 | 28125.8 |
| outer membrane protein assembly factor bama | SAMN05444145_1068 | Not Available | Positive | 2321675 - 2324074 | 91520.4 |
| signal transduction histidine kinase | SAMN05444145_1069 | Not Available | Negative | 2324090 - 2328049 | 149169.0 |
| hypothetical protein | SAMN05444145_10610 | Not Available | Positive | 2328348 - 2330783 | 87120.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
