Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choloylglycine hydrolase | SAMN05444145_105285 | Not Available | Negative | 2279834 - 2280877 | 38248.6 |
| gtp-binding protein | SAMN05444145_105286 | Not Available | Positive | 2281095 - 2281691 | 22486.2 |
| ribose-phosphate pyrophosphokinase | SAMN05444145_105287 | Not Available | Positive | 2281855 - 2282796 | 34183.6 |
| signal transduction histidine kinase | SAMN05444145_105288 | Not Available | Negative | 2282874 - 2286902 | 149982.0 |
| heparinase ii/iii-like protein | SAMN05444145_105289 | Not Available | Negative | 2287032 - 2289569 | 94873.9 |
| glucokinase | SAMN05444145_105290 | Not Available | Negative | 2289572 - 2290507 | 32289.0 |
| hypothetical protein | SAMN05444145_105291 | Not Available | Negative | 2290507 - 2292150 | 61515.4 |
| arylsulfatase a | SAMN05444145_105292 | Not Available | Negative | 2292175 - 2293845 | 64200.4 |
| choline-sulfatase/glucosamine-6-phosphate deaminase | SAMN05444145_105293 | Not Available | Negative | 2293860 - 2295263 | 51467.0 |
| heparan-sulfate lyase | SAMN05444145_105294 | Not Available | Positive | 2295541 - 2297478 | 75123.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
