Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_105275 | Not Available | Negative | 2267700 - 2270735 | 111518.0 |
| hypothetical protein | SAMN05444145_105276 | Not Available | Positive | 2271262 - 2272923 | 64210.8 |
| preprotein translocase subunit secg | SAMN05444145_105277 | Not Available | Negative | 2273027 - 2273395 | 13000.9 |
| hypothetical protein | SAMN05444145_105278 | Not Available | Negative | 2273408 - 2273896 | 17919.2 |
| lipopolysaccharide-assembly | SAMN05444145_105279 | Not Available | Negative | 2273904 - 2274413 | 18489.0 |
| regulatory protein, fis family | SAMN05444145_105280 | Not Available | Negative | 2274417 - 2275652 | 45769.2 |
| hypothetical protein | SAMN05444145_105281 | Not Available | Negative | 2275653 - 2276366 | 25709.7 |
| hypothetical protein | SAMN05444145_105282 | Not Available | Positive | 2276429 - 2276548 | 4562.79 |
| arginine decarboxylase | SAMN05444145_105283 | Not Available | Positive | 2276584 - 2277978 | 53987.0 |
| lipid a 3-o-deacylase (pagl) | SAMN05444145_105284 | Not Available | Positive | 2278368 - 2279780 | 51931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
