Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00159 family protein | SAMN05444145_105265 | Not Available | Positive | 2251626 - 2252426 | 29394.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444145_105266 | Not Available | Positive | 2252579 - 2253109 | 19674.5 |
| fimbrillin-like | SAMN05444145_105267 | Not Available | Negative | 2253174 - 2256113 | 106459.0 |
| fimbrillin-like | SAMN05444145_105268 | Not Available | Negative | 2256269 - 2257549 | 47070.9 |
| protein of unknown function | SAMN05444145_105269 | Not Available | Negative | 2257601 - 2258548 | 34497.6 |
| ompa family protein | SAMN05444145_105270 | Not Available | Negative | 2258545 - 2259942 | 51271.2 |
| beta-glucosidase | SAMN05444145_105271 | Not Available | Negative | 2260215 - 2262449 | 80937.6 |
| protein of unknown function | SAMN05444145_105272 | Not Available | Negative | 2262528 - 2264588 | 73271.1 |
| glucosylceramidase | SAMN05444145_105273 | Not Available | Negative | 2264609 - 2266111 | 54892.5 |
| starch-binding associating with outer membrane | SAMN05444145_105274 | Not Available | Negative | 2266133 - 2267677 | 58545.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
