Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101134 | Not Available | Negative | 173490 - 174389 | 32001.6 |
| hypothetical protein | SAMN05444145_101135 | Not Available | Negative | 174367 - 175137 | 27593.4 |
| phosphoserine phosphatase | SAMN05444145_101136 | Not Available | Negative | 175144 - 176367 | 45330.8 |
| small conductance mechanosensitive channel | SAMN05444145_101137 | Not Available | Positive | 176478 - 177389 | 33517.8 |
| hypothetical protein | SAMN05444145_101138 | Not Available | Positive | 177393 - 177821 | 15777.2 |
| hypothetical protein | SAMN05444145_101139 | Not Available | Positive | 177844 - 178260 | 15217.2 |
| methylglyoxal synthase | SAMN05444145_101140 | Not Available | Positive | 178277 - 178765 | 18346.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444145_101141 | Not Available | Negative | 178819 - 180327 | 55542.2 |
| acyl carrier protein | SAMN05444145_101142 | Not Available | Negative | 180388 - 181410 | 37925.3 |
| hypothetical protein | SAMN05444145_101143 | Not Available | Negative | 181447 - 182913 | 53153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
