Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | SAMN05444145_105203 | Not Available | Negative | 2203975 - 2204760 | 28738.5 |
| dephospho-coa kinase | SAMN05444145_105204 | Not Available | Negative | 2204780 - 2205373 | 21337.2 |
| hypothetical protein | SAMN05444145_105205 | Not Available | Negative | 2205370 - 2205765 | 14893.1 |
| protein translocase subunit secf /protein translocase subunit secd | SAMN05444145_105206 | Not Available | Negative | 2205914 - 2208940 | 110117.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444145_105207 | Not Available | Positive | 2209089 - 2209967 | 32462.6 |
| quaternary ammonium compound-resistance protein suge | SAMN05444145_105208 | Not Available | Negative | 2209964 - 2210284 | 11874.3 |
| peptidase s24-like | SAMN05444145_105209 | Not Available | Negative | 2210986 - 2211420 | 16452.7 |
| hypothetical protein | SAMN05444145_105210 | Not Available | Positive | 2211751 - 2212071 | 12079.9 |
| hypothetical protein | SAMN05444145_105211 | Not Available | Positive | 2212076 - 2212360 | 10961.0 |
| hypothetical protein | SAMN05444145_105212 | Not Available | Positive | 2212365 - 2212589 | 8207.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
