Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised acr, ykgg family cog1556 | SAMN05444145_105193 | Not Available | Positive | 2196208 - 2196849 | 23384.2 |
| hypothetical protein | SAMN05444145_105194 | Not Available | Positive | 2196858 - 2197466 | 21823.1 |
| dna repair protein rada/sms | SAMN05444145_105195 | Not Available | Positive | 2197468 - 2198841 | 49026.5 |
| udp-glucuronate decarboxylase | SAMN05444145_105196 | Not Available | Positive | 2198938 - 2199903 | 35823.2 |
| thioredoxin | SAMN05444145_105197 | Not Available | Positive | 2199923 - 2200246 | 12823.5 |
| hypothetical protein | SAMN05444145_105198 | Not Available | Negative | 2200243 - 2200899 | 23403.0 |
| protein of unknown function | SAMN05444145_105199 | Not Available | Negative | 2200912 - 2201805 | 32133.4 |
| trna1val (adenine37-n6)-methyltransferase | SAMN05444145_105200 | Not Available | Negative | 2201859 - 2202560 | 25901.1 |
| tigr02757 family protein | SAMN05444145_105201 | Not Available | Negative | 2202562 - 2203344 | 30119.0 |
| lipoprotein-releasing system atp-binding protein | SAMN05444145_105202 | Not Available | Negative | 2203328 - 2203978 | 23523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
