Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05444145_105183 | Not Available | Positive | 2177303 - 2178481 | 44281.8 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05444145_105184 | Not Available | Positive | 2178509 - 2181337 | 104706.0 |
| susd family protein | SAMN05444145_105185 | Not Available | Positive | 2181350 - 2182729 | 50581.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_105186 | Not Available | Positive | 2182745 - 2186218 | 128982.0 |
| susd family protein | SAMN05444145_105187 | Not Available | Positive | 2186230 - 2187804 | 58696.6 |
| protein of unknown function | SAMN05444145_105188 | Not Available | Positive | 2187816 - 2188556 | 27932.0 |
| hypothetical protein | SAMN05444145_105189 | Not Available | Positive | 2188569 - 2190137 | 57619.2 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN05444145_105190 | Not Available | Positive | 2190230 - 2190868 | 24318.5 |
| protein of unknown function | SAMN05444145_105191 | Not Available | Positive | 2190892 - 2193510 | 97778.1 |
| protein of unknown function | SAMN05444145_105192 | Not Available | Positive | 2193522 - 2196050 | 93841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
