Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose phosphorylase | SAMN05444145_105173 | Not Available | Negative | 2165149 - 2167428 | 85896.4 |
| beta-phosphoglucomutase | SAMN05444145_105174 | Not Available | Negative | 2167410 - 2168066 | 23006.7 |
| polysaccharide export outer membrane protein | SAMN05444145_105175 | Not Available | Positive | 2168223 - 2169020 | 29199.2 |
| capsular exopolysaccharide family | SAMN05444145_105176 | Not Available | Positive | 2169030 - 2171486 | 91778.1 |
| hypothetical protein | SAMN05444145_105177 | Not Available | Positive | 2171490 - 2171879 | 14440.3 |
| nucleotidyl transferase | SAMN05444145_105178 | Not Available | Negative | 2171956 - 2172867 | 33723.1 |
| peptidase family m23 | SAMN05444145_105179 | Not Available | Positive | 2173000 - 2173869 | 32390.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05444145_105180 | Not Available | Positive | 2173877 - 2175028 | 41305.5 |
| regulator of sigma e protease | SAMN05444145_105181 | Not Available | Positive | 2175042 - 2176373 | 50659.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_105182 | Not Available | Positive | 2176563 - 2177141 | 22261.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
