Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | SAMN05444145_105163 | Not Available | Negative | 2151768 - 2152553 | 27817.4 |
| shikimate kinase | SAMN05444145_105164 | Not Available | Negative | 2152565 - 2153095 | 19862.8 |
| dna topoisomerase iv subunit a | SAMN05444145_105165 | Not Available | Negative | 2153105 - 2155945 | 106500.0 |
| topoisomerase-4 subunit b | SAMN05444145_105166 | Not Available | Negative | 2155952 - 2157823 | 70273.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05444145_105167 | Not Available | Negative | 2157830 - 2158552 | 27618.4 |
| carboxypepd_reg-like domain-containing protein | SAMN05444145_105168 | Not Available | Positive | 2158877 - 2161237 | 88801.9 |
| threonine/homoserine efflux transporter rhta | SAMN05444145_105169 | Not Available | Negative | 2161299 - 2162288 | 35561.0 |
| lema protein | SAMN05444145_105170 | Not Available | Negative | 2162289 - 2162864 | 21371.3 |
| uncharacterized protein | SAMN05444145_105171 | Not Available | Negative | 2162884 - 2163783 | 31464.0 |
| glycosidase | SAMN05444145_105172 | Not Available | Negative | 2163854 - 2165134 | 48855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
