Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-phosphogluconate aldolase | SAMN05444145_105153 | Not Available | Negative | 2137163 - 2137831 | 23915.1 |
| 2-dehydro-3-deoxygluconokinase | SAMN05444145_105154 | Not Available | Negative | 2137990 - 2139009 | 37061.8 |
| d-glucuronate isomerase | SAMN05444145_105155 | Not Available | Negative | 2139024 - 2140436 | 54462.6 |
| protein of unknown function | SAMN05444145_105156 | Not Available | Positive | 2140643 - 2141764 | 40832.4 |
| 2-dehydro-3-deoxygluconokinase | SAMN05444145_105157 | Not Available | Positive | 2141933 - 2142979 | 38322.4 |
| tetratricopeptide repeat-containing protein | SAMN05444145_105158 | Not Available | Negative | 2143193 - 2144536 | 50121.6 |
| dna gyrase subunit a | SAMN05444145_105159 | Not Available | Negative | 2144574 - 2147126 | 94840.1 |
| formate/nitrite transporter | SAMN05444145_105160 | Not Available | Positive | 2147472 - 2148251 | 27704.6 |
| hypothetical protein | SAMN05444145_105161 | Not Available | Negative | 2148268 - 2148870 | 21683.6 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05444145_105162 | Not Available | Negative | 2148884 - 2151679 | 101743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
