Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s24-like | SAMN05444145_105143 | Not Available | Negative | 2124511 - 2124936 | 15975.1 |
| helicase conserved c-terminal domain-containing protein | SAMN05444145_105144 | Not Available | Positive | 2126096 - 2126599 | 19026.1 |
| hypothetical protein | SAMN05444145_105145 | Not Available | Positive | 2126822 - 2127133 | 11491.7 |
| hypothetical protein | SAMN05444145_105146 | Not Available | Negative | 2127228 - 2127521 | 11665.5 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05444145_105147 | Not Available | Negative | 2128183 - 2129352 | 42727.9 |
| 23s rrna pseudouridine2605 synthase | SAMN05444145_105148 | Not Available | Negative | 2129625 - 2130974 | 52051.3 |
| multidrug resistance protein, mate family | SAMN05444145_105149 | Not Available | Positive | 2131116 - 2132441 | 48873.9 |
| d-altronate dehydratase | SAMN05444145_105150 | Not Available | Negative | 2132554 - 2134044 | 54431.0 |
| tagaturonate reductase | SAMN05444145_105151 | Not Available | Negative | 2134115 - 2135572 | 55369.7 |
| mfs transporter, acs family, hexuronate transporter | SAMN05444145_105152 | Not Available | Negative | 2135592 - 2137055 | 53978.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
