Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101124 | Not Available | Positive | 158419 - 160194 | 62834.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_101125 | Not Available | Positive | 160292 - 163411 | 114372.0 |
| ragb/susd domain-containing protein | SAMN05444145_101126 | Not Available | Positive | 163418 - 165061 | 61936.9 |
| hypothetical protein | SAMN05444145_101127 | Not Available | Positive | 165075 - 165980 | 33435.4 |
| 2-isopropylmalate synthase | SAMN05444145_101128 | Not Available | Positive | 166149 - 167669 | 55221.0 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444145_101129 | Not Available | Positive | 167671 - 169047 | 49260.9 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05444145_101130 | Not Available | Positive | 169060 - 169653 | 22001.8 |
| d-citramalate synthase | SAMN05444145_101131 | Not Available | Positive | 169663 - 171204 | 57125.1 |
| 3-isopropylmalate dehydrogenase | SAMN05444145_101132 | Not Available | Positive | 171194 - 172255 | 37989.5 |
| gtp-binding protein | SAMN05444145_101133 | Not Available | Positive | 172547 - 173560 | 36678.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
