Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_105113 | Not Available | Negative | 2096667 - 2097596 | 34339.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_105114 | Not Available | Negative | 2097608 - 2098552 | 35932.0 |
| hypothetical protein | SAMN05444145_105115 | Not Available | Negative | 2098577 - 2099623 | 38403.9 |
| starch-binding associating with outer membrane | SAMN05444145_105116 | Not Available | Negative | 2099647 - 2101401 | 64972.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_105117 | Not Available | Negative | 2101414 - 2104260 | 104607.0 |
| starch-binding associating with outer membrane | SAMN05444145_105118 | Not Available | Negative | 2104299 - 2106161 | 70394.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_105119 | Not Available | Negative | 2106173 - 2109202 | 112574.0 |
| hypothetical protein | SAMN05444145_105120 | Not Available | Negative | 2109244 - 2109417 | 6295.7 |
| glycosyl hydrolase family 88 | SAMN05444145_105121 | Not Available | Negative | 2109552 - 2110724 | 44010.4 |
| hypothetical protein | SAMN05444145_105122 | Not Available | Positive | 2111404 - 2112411 | 37815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
