Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_10583 | Not Available | Positive | 2046314 - 2048947 | 97167.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10584 | Not Available | Negative | 2049018 - 2049572 | 19542.5 |
| hypothetical protein | SAMN05444145_10585 | Not Available | Negative | 2049686 - 2051410 | 64125.6 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05444145_10586 | Not Available | Negative | 2051410 - 2052429 | 36796.4 |
| electron transfer flavoprotein beta subunit | SAMN05444145_10587 | Not Available | Negative | 2052442 - 2053323 | 31115.5 |
| adenylosuccinate synthetase | SAMN05444145_10588 | Not Available | Negative | 2053481 - 2054746 | 46699.9 |
| leucine rich repeat-containing protein | SAMN05444145_10589 | Not Available | Negative | 2055143 - 2055751 | 22423.5 |
| hypothetical protein | SAMN05444145_10590 | Not Available | Negative | 2055760 - 2056098 | 12600.1 |
| dna ligase (nad+) | SAMN05444145_10591 | Not Available | Positive | 2056252 - 2058276 | 75628.1 |
| dihydrodipicolinate synthase | SAMN05444145_10592 | Not Available | Positive | 2058346 - 2059236 | 32405.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
