Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_10573 | Not Available | Negative | 2030772 - 2031506 | 26433.4 |
| rubrerythrin | SAMN05444145_10574 | Not Available | Negative | 2031633 - 2032187 | 20914.8 |
| thioredoxin-like | SAMN05444145_10575 | Not Available | Negative | 2032311 - 2033243 | 35545.6 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05444145_10576 | Not Available | Positive | 2033382 - 2034929 | 55862.6 |
| l-glutaminase | SAMN05444145_10577 | Not Available | Positive | 2034934 - 2035917 | 34580.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10578 | Not Available | Positive | 2036573 - 2039374 | 104851.0 |
| susd family protein | SAMN05444145_10579 | Not Available | Positive | 2039388 - 2040980 | 61113.1 |
| protein of unknown function | SAMN05444145_10580 | Not Available | Positive | 2041010 - 2041993 | 35857.3 |
| pkd-like family protein | SAMN05444145_10581 | Not Available | Positive | 2042032 - 2043612 | 57912.4 |
| protein of unknown function | SAMN05444145_10582 | Not Available | Positive | 2043821 - 2046301 | 93378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
