Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 2025121 - 2025197 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2025254 - 2025331 | Not Available |
| radical sam enzyme, rsam/lipoprotein system | SAMN05444145_10565 | Not Available | Negative | 2025437 - 2026510 | 40649.7 |
| hypothetical protein | SAMN05444145_10566 | Not Available | Negative | 2026514 - 2026786 | 9825.78 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05444145_10567 | Not Available | Positive | 2026923 - 2027123 | 7153.49 |
| 6-phosphofructokinase 1 | SAMN05444145_10568 | Not Available | Positive | 2027308 - 2028543 | 45347.6 |
| hypothetical protein | SAMN05444145_10569 | Not Available | Positive | 2028639 - 2029529 | 32373.1 |
| uncharacterized spbc2 prophage-derived protein yoqj | SAMN05444145_10570 | Not Available | Negative | 2029578 - 2030087 | 18613.2 |
| ytxh-like protein | SAMN05444145_10571 | Not Available | Positive | 2030156 - 2030368 | 7634.23 |
| hypothetical protein | SAMN05444145_10572 | Not Available | Positive | 2030382 - 2030711 | 11892.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
