Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10543 | Not Available | Positive | 1998333 - 1998857 | 19383.9 |
| hypothetical protein | SAMN05444145_10544 | Not Available | Positive | 1998929 - 1999210 | 10464.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_10545 | Not Available | Negative | 1999195 - 2000184 | 37153.8 |
| hypothetical protein | SAMN05444145_10546 | Not Available | Positive | 2000290 - 2000754 | 16767.5 |
| methylmalonyl-coa mutase metallochaperone meab | SAMN05444145_10547 | Not Available | Positive | 2000761 - 2001888 | 41305.4 |
| nad-dependent deacetylase | SAMN05444145_10548 | Not Available | Negative | 2001969 - 2002682 | 26191.3 |
| glutamate decarboxylase | SAMN05444145_10549 | Not Available | Positive | 2002778 - 2004193 | 54169.3 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase 1 | SAMN05444145_10550 | Not Available | Positive | 2004373 - 2005134 | 29026.7 |
| 2,4-dienoyl-coa reductase | SAMN05444145_10551 | Not Available | Positive | 2005212 - 2006423 | 44959.6 |
| hypothetical protein | SAMN05444145_10552 | Not Available | Positive | 2006423 - 2007235 | 30091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
