Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s2p | SAMN05444145_10533 | Not Available | Negative | 1989280 - 1990194 | 33093.9 |
| small subunit ribosomal protein s9 | SAMN05444145_10534 | Not Available | Negative | 1990377 - 1990763 | 14265.5 |
| lsu ribosomal protein l13p | SAMN05444145_10535 | Not Available | Negative | 1990769 - 1991224 | 16641.3 |
| tonb family c-terminal domain-containing protein | SAMN05444145_10536 | Not Available | Negative | 1991409 - 1992908 | 55056.1 |
| tonb family c-terminal domain-containing protein | SAMN05444145_10537 | Not Available | Negative | 1993018 - 1994196 | 43799.5 |
| glutaconyl-coa decarboxylase beta subunit | SAMN05444145_10538 | Not Available | Negative | 1994283 - 1995494 | 42472.3 |
| biotin-requiring enzyme | SAMN05444145_10539 | Not Available | Negative | 1995499 - 1995960 | 15789.9 |
| hypothetical protein | SAMN05444145_10540 | Not Available | Negative | 1995974 - 1996309 | 12440.6 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN05444145_10541 | Not Available | Negative | 1996323 - 1997885 | 56827.2 |
| methylmalonyl-coa epimerase | SAMN05444145_10542 | Not Available | Negative | 1997890 - 1998300 | 15162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
