Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN05444145_10523 | Not Available | Positive | 1976447 - 1977397 | 36592.7 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444145_10524 | Not Available | Positive | 1977487 - 1978053 | 20975.0 |
| maltose o-acetyltransferase | SAMN05444145_10525 | Not Available | Negative | 1978048 - 1978596 | 19724.7 |
| exodeoxyribonuclease v, gamma subunit | SAMN05444145_10526 | Not Available | Negative | 1978617 - 1981457 | 107526.0 |
| putative auto-transporter adhesin, head gin domain | SAMN05444145_10527 | Not Available | Negative | 1981454 - 1982155 | 25010.2 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN05444145_10528 | Not Available | Positive | 1982251 - 1985397 | 118019.0 |
| abc-type multidrug transport system, atpase and permease component | SAMN05444145_10529 | Not Available | Positive | 1985394 - 1987091 | 61456.9 |
| hypothetical protein | SAMN05444145_10530 | Not Available | Positive | 1987092 - 1987952 | 31461.2 |
| peptidase s24-like | SAMN05444145_10531 | Not Available | Positive | 1987949 - 1988359 | 15506.3 |
| elongation factor ts | SAMN05444145_10532 | Not Available | Negative | 1988415 - 1989221 | 29278.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
