Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | SAMN05444145_101115 | Not Available | Positive | 144436 - 145623 | 45118.9 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 144625 - 144715 | 18.01 |
| hypothetical protein | SAMN05444145_101116 | Not Available | Positive | 145620 - 146882 | 46695.0 |
| glycosyl hydrolases family 2 | SAMN05444145_101117 | Not Available | Positive | 146904 - 149621 | 103765.0 |
| beta-galactosidase | SAMN05444145_101118 | Not Available | Positive | 149634 - 150407 | 28245.5 |
| beta-glucosidase | SAMN05444145_101119 | Not Available | Positive | 150434 - 152638 | 80867.2 |
| hypothetical protein | SAMN05444145_101120 | Not Available | Positive | 152930 - 155353 | 90892.1 |
| alanine dehydrogenase | SAMN05444145_101121 | Not Available | Positive | 155444 - 156550 | 39690.3 |
| hypothetical protein | SAMN05444145_101122 | Not Available | Positive | 156935 - 157072 | 4966.16 |
| hypothetical protein | SAMN05444145_101123 | Not Available | Positive | 157312 - 158385 | 38252.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
