Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | SAMN05444145_10513 | Not Available | Negative | 1964630 - 1965481 | 30373.2 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | SAMN05444145_10514 | Not Available | Negative | 1965494 - 1966603 | 39828.2 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | SAMN05444145_10515 | Not Available | Negative | 1966624 - 1967979 | 49801.3 |
| tatd dnase family protein | SAMN05444145_10516 | Not Available | Positive | 1968308 - 1968898 | 21613.9 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN05444145_10517 | Not Available | Positive | 1968891 - 1969616 | 26031.9 |
| glycerate dehydrogenase | SAMN05444145_10518 | Not Available | Positive | 1969656 - 1970594 | 33698.5 |
| ala-trna(pro) hydrolase | SAMN05444145_10519 | Not Available | Positive | 1970596 - 1971111 | 20415.9 |
| phosphoglycerate mutase | SAMN05444145_10520 | Not Available | Negative | 1971161 - 1972687 | 55858.7 |
| alanyl-trna synthetase | SAMN05444145_10521 | Not Available | Negative | 1972706 - 1975327 | 97782.6 |
| peptidase family m23 | SAMN05444145_10522 | Not Available | Positive | 1975426 - 1976445 | 38754.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
