Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05444145_1053 | Not Available | Negative | 1949521 - 1951599 | 76342.0 |
| hypothetical protein | SAMN05444145_1054 | Not Available | Negative | 1951694 - 1953919 | 79207.7 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_1055 | Not Available | Negative | 1953926 - 1954801 | 32795.4 |
| starch-binding associating with outer membrane | SAMN05444145_1056 | Not Available | Negative | 1954826 - 1956580 | 66261.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_1057 | Not Available | Negative | 1956594 - 1960160 | 132712.0 |
| fecr family protein | SAMN05444145_1058 | Not Available | Negative | 1960320 - 1961303 | 37650.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_1059 | Not Available | Negative | 1961373 - 1961924 | 21711.1 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit f | SAMN05444145_10510 | Not Available | Negative | 1962074 - 1963336 | 46561.4 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit e | SAMN05444145_10511 | Not Available | Negative | 1963361 - 1963969 | 22010.8 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | SAMN05444145_10512 | Not Available | Negative | 1963981 - 1964628 | 23456.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
