Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444145_104300 | Not Available | Negative | 1934968 - 1936443 | 56456.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104301 | Not Available | Negative | 1936457 - 1940023 | 132822.0 |
| fecr family protein | SAMN05444145_104302 | Not Available | Negative | 1940174 - 1941118 | 34979.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_104303 | Not Available | Negative | 1941188 - 1941775 | 22414.2 |
| iron complex transport system substrate-binding protein | SAMN05444145_104304 | Not Available | Negative | 1941877 - 1943022 | 41353.2 |
| Trna-leu | Not Available | Not Available | Positive | 1943184 - 1943268 | Not Available |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05444145_104306 | Not Available | Negative | 1943338 - 1944006 | 25112.3 |
| serine protease, subtilisin family | SAMN05444145_104307 | Not Available | Positive | 1944167 - 1946242 | 73807.6 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_1051 | Not Available | Positive | 1946788 - 1947069 | 9597.82 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN05444145_1052 | Not Available | Negative | 1947133 - 1949349 | 77193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
