Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_104290 | Not Available | Negative | 1913216 - 1915789 | 95699.9 |
| starch-binding associating with outer membrane | SAMN05444145_104291 | Not Available | Negative | 1915867 - 1917486 | 61802.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104292 | Not Available | Negative | 1917505 - 1920570 | 114318.0 |
| fad dependent oxidoreductase | SAMN05444145_104293 | Not Available | Negative | 1920606 - 1922909 | 85828.8 |
| transporter, sss family | SAMN05444145_104294 | Not Available | Negative | 1922917 - 1924551 | 58950.7 |
| transcriptional regulator, laci family | SAMN05444145_104295 | Not Available | Positive | 1924799 - 1925848 | 39204.8 |
| major paralogous domain-containing protein | SAMN05444145_104296 | Not Available | Positive | 1926041 - 1927474 | 52201.8 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_104297 | Not Available | Negative | 1927551 - 1930811 | 116917.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444145_104298 | Not Available | Negative | 1930825 - 1932789 | 73381.1 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_104299 | Not Available | Negative | 1932813 - 1934948 | 78452.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
