Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase/recombinase xerc | SAMN05444145_104280 | Not Available | Negative | 1896548 - 1897450 | 34360.3 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444145_104281 | Not Available | Positive | 1897565 - 1898149 | 21832.3 |
| purple acid phosphatase, n-terminal domain | SAMN05444145_104282 | Not Available | Positive | 1898396 - 1899589 | 44578.7 |
| alpha-glucosidase | SAMN05444145_104283 | Not Available | Negative | 1899635 - 1901566 | 71582.1 |
| glycosyl hydrolases family 16 | SAMN05444145_104284 | Not Available | Negative | 1901580 - 1903106 | 57245.2 |
| hypothetical protein | SAMN05444145_104285 | Not Available | Negative | 1903119 - 1905959 | 106844.0 |
| beta-glucuronidase | SAMN05444145_104286 | Not Available | Negative | 1905956 - 1908424 | 91890.8 |
| fasciclin domain-containing protein | SAMN05444145_104287 | Not Available | Negative | 1908431 - 1908955 | 19837.7 |
| sialate o-acetylesterase | SAMN05444145_104288 | Not Available | Negative | 1908952 - 1910376 | 51851.9 |
| hypothetical protein | SAMN05444145_104289 | Not Available | Negative | 1910383 - 1913199 | 104950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
