Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_104270 | Not Available | Positive | 1887793 - 1888710 | 34053.9 |
| Trna-leu | Not Available | Not Available | Positive | 1888889 - 1888973 | Not Available |
| hypothetical protein | SAMN05444145_104272 | Not Available | Positive | 1889071 - 1890624 | 56243.3 |
| glycosyl transferase family 2 | SAMN05444145_104273 | Not Available | Positive | 1890628 - 1891503 | 33786.7 |
| stealth protein cr1, conserved region 1 | SAMN05444145_104274 | Not Available | Positive | 1891512 - 1892474 | 37274.3 |
| n-terminal domain of galactosyltransferase | SAMN05444145_104275 | Not Available | Negative | 1892498 - 1893331 | 31133.6 |
| protein of unknown function | SAMN05444145_104276 | Not Available | Negative | 1894324 - 1895058 | 26867.4 |
| Trna-glu | Not Available | Not Available | Positive | 1895192 - 1895266 | Not Available |
| hypothetical protein | SAMN05444145_104278 | Not Available | Positive | 1895519 - 1896034 | 18162.0 |
| putative sigma-54 modulation protein | SAMN05444145_104279 | Not Available | Negative | 1896229 - 1896525 | 11164.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
