Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444145_104260 | Not Available | Positive | 1871153 - 1872670 | 56984.9 |
| hypothetical protein | SAMN05444145_104261 | Not Available | Positive | 1872693 - 1874300 | 58459.6 |
| hypothetical protein | SAMN05444145_104262 | Not Available | Positive | 1874356 - 1875837 | 54621.6 |
| hypothetical protein | SAMN05444145_104263 | Not Available | Positive | 1875840 - 1877315 | 55049.1 |
| mannan endo-1,4-beta-mannosidase | SAMN05444145_104264 | Not Available | Positive | 1877351 - 1878505 | 43414.9 |
| hypothetical protein | SAMN05444145_104265 | Not Available | Negative | 1878588 - 1879355 | 28640.2 |
| starch-binding associating with outer membrane | SAMN05444145_104266 | Not Available | Negative | 1879411 - 1881231 | 68968.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104267 | Not Available | Negative | 1881244 - 1884243 | 111073.0 |
| hypothetical protein | SAMN05444145_104268 | Not Available | Positive | 1884790 - 1886352 | 54750.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444145_104269 | Not Available | Positive | 1886365 - 1887750 | 50458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
