Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein hded, duf308 family | SAMN05444145_104250 | Not Available | Negative | 1854449 - 1855036 | 21179.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104251 | Not Available | Positive | 1855326 - 1858430 | 113783.0 |
| susd and ragb outer membrane lipoprotein | SAMN05444145_104252 | Not Available | Positive | 1858435 - 1860060 | 61111.5 |
| dna-3-methyladenine glycosylase i | SAMN05444145_104253 | Not Available | Negative | 1860070 - 1860657 | 22483.8 |
| protein of unknown function | SAMN05444145_104254 | Not Available | Negative | 1860725 - 1861660 | 35032.7 |
| beta-mannosidase | SAMN05444145_104255 | Not Available | Negative | 1861676 - 1864213 | 97563.6 |
| arac-type dna-binding protein | SAMN05444145_104256 | Not Available | Negative | 1864260 - 1865123 | 32978.1 |
| solute:na+ symporter, sss family | SAMN05444145_104257 | Not Available | Positive | 1865280 - 1866860 | 57435.7 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05444145_104258 | Not Available | Positive | 1866862 - 1867890 | 38490.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104259 | Not Available | Positive | 1868045 - 1871140 | 114313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
