Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna modification methylase | SAMN05444145_104240 | Not Available | Negative | 1845108 - 1846370 | 49051.9 |
| Trna-ser | Not Available | Not Available | Positive | 1846511 - 1846597 | Not Available |
| hypothetical protein | SAMN05444145_104242 | Not Available | Positive | 1846916 - 1848058 | 41641.7 |
| outer membrane protein transport protein (ompp1/fadl/todx) | SAMN05444145_104243 | Not Available | Positive | 1848086 - 1849777 | 61919.3 |
| prolyl-trna synthetase | SAMN05444145_104244 | Not Available | Positive | 1849874 - 1851358 | 56392.5 |
| cation diffusion facilitator family transporter | SAMN05444145_104245 | Not Available | Positive | 1851590 - 1852489 | 32349.9 |
| rna polymerase, sigma subunit, ecf family | SAMN05444145_104246 | Not Available | Positive | 1852729 - 1853313 | 22491.2 |
| hypothetical protein | SAMN05444145_104247 | Not Available | Positive | 1853380 - 1853529 | 5709.48 |
| catechol 2,3-dioxygenase | SAMN05444145_104248 | Not Available | Positive | 1853627 - 1854019 | 14636.6 |
| uncharacterized conserved protein yeao, duf488 family | SAMN05444145_104249 | Not Available | Positive | 1854024 - 1854395 | 14069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
