Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | SAMN05444145_104230 | Not Available | Negative | 1827356 - 1829668 | 86442.8 |
| family of unknown function | SAMN05444145_104231 | Not Available | Negative | 1829643 - 1834409 | 172648.0 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN05444145_104232 | Not Available | Negative | 1834594 - 1836132 | 55958.2 |
| mj0570-related uncharacterized domain-containing protein | SAMN05444145_104233 | Not Available | Positive | 1836180 - 1836899 | 26512.8 |
| site-specific recombinase xerd | SAMN05444145_104234 | Not Available | Positive | 1837209 - 1838465 | 48111.8 |
| hypothetical protein | SAMN05444145_104235 | Not Available | Positive | 1838473 - 1839270 | 30917.0 |
| putative dna primase/helicase | SAMN05444145_104236 | Not Available | Positive | 1839711 - 1841192 | 56661.3 |
| primase c terminal 2 (prict-2) | SAMN05444145_104237 | Not Available | Positive | 1841272 - 1842198 | 34670.4 |
| hypothetical protein | SAMN05444145_104238 | Not Available | Positive | 1842727 - 1843377 | 25790.0 |
| dgqhr domain-containing protein | SAMN05444145_104239 | Not Available | Negative | 1843382 - 1845094 | 65951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
