Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_104220 | Not Available | Negative | 1819727 - 1821328 | 58623.2 |
| hypothetical protein | SAMN05444145_104221 | Not Available | Negative | 1821336 - 1822100 | 27257.3 |
| hypothetical protein | SAMN05444145_104222 | Not Available | Negative | 1822109 - 1822858 | 26687.9 |
| lipoprotein-releasing system permease protein | SAMN05444145_104223 | Not Available | Positive | 1823088 - 1824332 | 45690.1 |
| demethylmenaquinone methyltransferase | SAMN05444145_104224 | Not Available | Positive | 1824329 - 1825045 | 26784.5 |
| hypothetical protein | SAMN05444145_104225 | Not Available | Positive | 1825042 - 1825548 | 18704.1 |
| hypothetical protein | SAMN05444145_104226 | Not Available | Positive | 1825548 - 1826012 | 16911.5 |
| hypothetical protein | SAMN05444145_104227 | Not Available | Positive | 1826117 - 1826350 | 7766.33 |
| multimeric flavodoxin wrba | SAMN05444145_104228 | Not Available | Positive | 1826469 - 1827083 | 21789.5 |
| Trna-ser | Not Available | Not Available | Positive | 1827151 - 1827241 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
