Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative binding domain-containing protein, n-terminal | SAMN05444145_104210 | Not Available | Positive | 1809090 - 1810121 | 36167.3 |
| hypothetical protein | SAMN05444145_104211 | Not Available | Negative | 1810192 - 1810782 | 22020.8 |
| hypothetical protein | SAMN05444145_104212 | Not Available | Negative | 1810754 - 1811281 | 19198.8 |
| acyl dehydratase | SAMN05444145_104213 | Not Available | Negative | 1811429 - 1811893 | 17779.4 |
| hypothetical protein | SAMN05444145_104214 | Not Available | Negative | 1812031 - 1813221 | 44816.1 |
| triosephosphate isomerase | SAMN05444145_104215 | Not Available | Negative | 1813304 - 1814062 | 26767.1 |
| lysyl-trna synthetase, class ii | SAMN05444145_104216 | Not Available | Negative | 1814086 - 1815813 | 66201.4 |
| dna/rna endonuclease g, nuc1 | SAMN05444145_104217 | Not Available | Positive | 1815997 - 1817544 | 56049.6 |
| undecaprenyl-diphosphatase | SAMN05444145_104218 | Not Available | Negative | 1817573 - 1818217 | 23817.6 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN05444145_104219 | Not Available | Negative | 1818225 - 1819730 | 56958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
