Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s13 | SAMN05444145_104200 | Not Available | Positive | 1796055 - 1796435 | 14092.4 |
| ssu ribosomal protein s11p | SAMN05444145_104201 | Not Available | Positive | 1796449 - 1796838 | 13828.9 |
| small subunit ribosomal protein s4 | SAMN05444145_104202 | Not Available | Positive | 1796889 - 1797497 | 22756.5 |
| dna-directed rna polymerase subunit alpha | SAMN05444145_104203 | Not Available | Positive | 1797519 - 1798511 | 36994.8 |
| lsu ribosomal protein l17p | SAMN05444145_104204 | Not Available | Positive | 1798516 - 1799130 | 22121.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_104205 | Not Available | Positive | 1799585 - 1802593 | 112354.0 |
| susd family protein | SAMN05444145_104206 | Not Available | Positive | 1802620 - 1804077 | 54853.1 |
| protein of unknown function | SAMN05444145_104207 | Not Available | Positive | 1804086 - 1804889 | 29987.1 |
| pkd-like family protein | SAMN05444145_104208 | Not Available | Positive | 1804903 - 1806432 | 57390.1 |
| protein of unknown function | SAMN05444145_104209 | Not Available | Positive | 1806456 - 1809053 | 98306.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
