Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s8p | SAMN05444145_104190 | Not Available | Positive | 1790791 - 1791189 | 14683.9 |
| large subunit ribosomal protein l6 | SAMN05444145_104191 | Not Available | Positive | 1791215 - 1791802 | 20937.6 |
| lsu ribosomal protein l18p | SAMN05444145_104192 | Not Available | Positive | 1791819 - 1792181 | 13124.0 |
| ssu ribosomal protein s5p | SAMN05444145_104193 | Not Available | Positive | 1792188 - 1792706 | 18106.2 |
| large subunit ribosomal protein l30 | SAMN05444145_104194 | Not Available | Positive | 1792721 - 1792975 | 9190.28 |
| lsu ribosomal protein l15p | SAMN05444145_104195 | Not Available | Positive | 1793004 - 1793450 | 15494.7 |
| protein translocase subunit secy/sec61 alpha | SAMN05444145_104196 | Not Available | Positive | 1793473 - 1794849 | 50368.7 |
| methionyl aminopeptidase | SAMN05444145_104197 | Not Available | Positive | 1794881 - 1795657 | 28011.6 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05444145_104198 | Not Available | Positive | 1795664 - 1795882 | 8207.17 |
| lsu ribosomal protein l36p | SAMN05444145_104199 | Not Available | Positive | 1795901 - 1796017 | 4496.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
