Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s19p | SAMN05444145_104180 | Not Available | Positive | 1786107 - 1786376 | 9823.98 |
| lsu ribosomal protein l22p | SAMN05444145_104181 | Not Available | Positive | 1786405 - 1786794 | 14847.6 |
| ssu ribosomal protein s3p | SAMN05444145_104182 | Not Available | Positive | 1786799 - 1787596 | 29164.5 |
| large subunit ribosomal protein l16 | SAMN05444145_104183 | Not Available | Positive | 1787627 - 1788055 | 16055.0 |
| large subunit ribosomal protein l29 | SAMN05444145_104184 | Not Available | Positive | 1788067 - 1788258 | 7252.01 |
| ssu ribosomal protein s17p | SAMN05444145_104185 | Not Available | Positive | 1788268 - 1788522 | 9814.24 |
| lsu ribosomal protein l14p | SAMN05444145_104186 | Not Available | Positive | 1788525 - 1788890 | 13245.3 |
| lsu ribosomal protein l24p | SAMN05444145_104187 | Not Available | Positive | 1788911 - 1789234 | 11491.3 |
| large subunit ribosomal protein l5 | SAMN05444145_104188 | Not Available | Positive | 1789234 - 1789794 | 21138.0 |
| ssu ribosomal protein s14p | SAMN05444145_104189 | Not Available | Positive | 1789813 - 1790094 | 10729.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
