Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_104160 | Not Available | Positive | 1767842 - 1768744 | 32583.6 |
| methyltransferase domain-containing protein | SAMN05444145_104161 | Not Available | Negative | 1768697 - 1769470 | 29747.7 |
| exodeoxyribonuclease vii small subunit | SAMN05444145_104162 | Not Available | Negative | 1769472 - 1769660 | 6951.48 |
| exodeoxyribonuclease vii large subunit | SAMN05444145_104163 | Not Available | Negative | 1769666 - 1770901 | 45074.9 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN05444145_104164 | Not Available | Negative | 1770901 - 1771812 | 32595.3 |
| tonb protein c-terminal | SAMN05444145_104165 | Not Available | Negative | 1771841 - 1772389 | 20577.0 |
| o(6)-alkylguanine repair protein ybaz | SAMN05444145_104166 | Not Available | Negative | 1772565 - 1772861 | 10524.7 |
| peptide chain release factor 1 | SAMN05444145_104167 | Not Available | Negative | 1772861 - 1773946 | 40802.4 |
| acetyl esterase/lipase | SAMN05444145_104168 | Not Available | Negative | 1774056 - 1774922 | 30958.7 |
| acetyl esterase/lipase | SAMN05444145_104169 | Not Available | Negative | 1774935 - 1775804 | 31619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
